https://www.marcusrb.com/tags/hpc/ Recent content in Hpc on MarcusRB - Bioinformatics, Data Scientist & Professor Hugo en Wed, 12 Feb 2025 00:00:00 +0000 https://www.marcusrb.com/posts/2025-02-12-why-docker-fails-in-hpc-and-how-singularity-fixes-it/ Wed, 12 Feb 2025 00:00:00 +0000 https://www.marcusrb.com/posts/2025-02-12-why-docker-fails-in-hpc-and-how-singularity-fixes-it/ A practical explanation of why Docker conflicts with shared HPC security models and how Singularity or Apptainer fit Slurm environments better. https://www.marcusrb.com/posts/2025-01-29-writing-your-first-production-ready-nextflow-pipeline/ Wed, 29 Jan 2025 00:00:00 +0000 https://www.marcusrb.com/posts/2025-01-29-writing-your-first-production-ready-nextflow-pipeline/ A practical guide to designing a first Nextflow pipeline that remains maintainable when it moves from local execution to HPC or cloud.